Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916180.1_cds_XP_016465880.1_58791
CDS Infomation

[gene=LOC107788689] [db_xref=GeneID:107788689] [protein=transcription factor ICE1-like] [protein_id=XP_016465880.1] [location=complement(join(21355..21438,22021..22191,22282..22518,23607..24701))] [gbkey=CDS]
Sequence

ATGCTCTCAAGAGTAAACAGTATGGTTTGGAATATGGAAGGCAAAGAAGAAGAAGAAGGA
GGAACTGCTTCTTGGACTCAAAACAAAGATGATATGGAAATGAGTGCACTTTCTACATTT
AAATCAATGCTAGATGGTGTAGCAGATGTAGACTGGTTTATGTCCAGTAACAATCACAGC
AACATGCAAAACAATACTAATATTTCTTTCACTACCCAAGATTTCACTGAAGCTGAAAAC
AGTAACTTGCTTCTACAGCCAGTAGATTCCTCATCTTCATCTTCAGCTTCTCATGTTTTC
AACAATCTTGACCCTTCTCAGGTACATTATTTCTTAGCCCAAAAAGCCATATCTCCAATG
CTAACTGCTTTATCTAACAACCCTTTGGACAGTGGTTTCAATTTGGGTTGTGAAAATGGA
TTTCTTGATAGTCAAGCTTTGGGTGGTTTGAGTAAAGGTGGGATTTTTACTGGTGGGTTT
CAAGATTTGAGATCCTTAAACCAAATGGGCAACCCCAATTTGAGTTCTTGTACGCAATTC
CCATCATTCCATTTGCTACAATTGCCCCAAAATAGTAACACTGGGTTTAGTCCACTGGGG
TTTAGTGATGGTTCTGTTAATGAGAATTCTCTGTTTCTCAATAGGTCCAAGTTGTTAAAA
CCACTTGATAATTTTACTTCAATTGGATCACAACCAACTCTTTTCCAAAAAAGGGCTGCT
CTTAGGAAGAACTTAGCTAATAATAGTGGCAGTTTGGGGGATTTGGGAGGTGAAATTGGT
GAGAAGGAAGAGGGTGAAATGAATGGAAAGAAGAGGAAGTGGGATAATGGGGATGAACTT
GAAGATGTTAGCATTGATGGTTTTACATTGAATTATGATTCAGATGAGTTTGTAGAAAAT
TGTAGTAATAAGGTGGAGGATAGTGTTAAAAATGGTGGAAATAGCTCAAATGCAACTAGC
ACTGTAACTGGTGGAGATCAGAAAGGGAAGAAAAAGGGGCCACCAGCCAAGAATTTGATG
GCTGAACGTCGACGTAGGAAGAAGCTAAACGATAGGCTTTACATGCTGAGGTCTGTTGTA
CCAAGGATTAGTAAGATGGACAGGGCTTCAATCTTAGGGGATGCAATCGAGTACCTAAAG
GAGCTTTTGCAGAAAATCAATGACCTGCATAATGAACTGGAGTCCACTCCCTCTAGCTCT
TCATTGACCCAAACAACAAGCTACTATCCTTTAACACCAACTACACCAGCTTTTCCAGGC
CACATCAAAGAAGAACTCTGCCCGAGTTCATTCGCAAGCCCACTGTCTAGCCCAACTGGA
CAACCTGCAAGGGTTGAAGTAAGAGCAAGAGAAGGAAGAGCCGTGAATATCCATATGTTC
TGCAGCCGCAGACCAGGCCTCTTACTCTCAACAATGAGAGTTCTGGACAACCTTGGACTG
GACATCCAACAAGCTGTTATCAGCTGCTTTAATGGATTCGCCTTAGATATCTTCAGAGCT
GAGCAATGCAAAGAAGGTCAAGACTTTCATCCTGATCAAATCAAAGCAGTATTGCTGGAT
TCAGCCGGCAGCCATGGGATGATATAA

Peptide Sequence

PEP ID

XP_016465880.1
PEP Infomation

PREDICTED: transcription factor ICE1-like [Nicotiana tabacum]
Sequence

MLSRVNSMVWNMEGKEEEEGGTASWTQNKDDMEMSALSTFKSMLDGVADVDWFMSSNNHS
NMQNNTNISFTTQDFTEAENSNLLLQPVDSSSSSSASHVFNNLDPSQVHYFLAQKAISPM
LTALSNNPLDSGFNLGCENGFLDSQALGGLSKGGIFTGGFQDLRSLNQMGNPNLSSCTQF
PSFHLLQLPQNSNTGFSPLGFSDGSVNENSLFLNRSKLLKPLDNFTSIGSQPTLFQKRAA
LRKNLANNSGSLGDLGGEIGEKEEGEMNGKKRKWDNGDELEDVSIDGFTLNYDSDEFVEN
CSNKVEDSVKNGGNSSNATSTVTGGDQKGKKKGPPAKNLMAERRRRKKLNDRLYMLRSVV
PRISKMDRASILGDAIEYLKELLQKINDLHNELESTPSSSSLTQTTSYYPLTPTTPAFPG
HIKEELCPSSFASPLSSPTGQPARVEVRAREGRAVNIHMFCSRRPGLLLSTMRVLDNLGL
DIQQAVISCFNGFALDIFRAEQCKEGQDFHPDQIKAVLLDSAGSHGMI

Transcript Sequence

Gene sequence data has not been registered.